Reactome is a free and open database of biological pathways. It helps you see how genes and proteins work together. You can upload a list of genes and find which pathways are active.
This tool lets you run pathway analysis from the command line. You can map identifiers across species and export diagrams. It is great for researchers studying gene expression or protein interactions.
Key features include enrichment analysis, token-based results, and support for human, mouse, and rat. You can filter results by statistical significance like FDR or p-value.
Global
mkdir -p ~/.claude/skills/reactome-databaseProject
mkdir -p .claude/skills/reactome-databaseSource Repository
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